GO page  


GO term
GO:0010100
Description
negative regulation of photomorphogenesis
Type
BP
GO depth
3
Number of genes
57
 

GO distribution

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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 3, showing 20 records out of 57 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT2G20180 ath Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.;phytochrome interacting factor 3-like 5 transcript=eq;prot=eq; GO:0010100 IMP
AT1G69935 ath Encodes a nuclear localized serine-arginine-aspartate-rich protein that acts as a negative regulator of photomorphogenesis.;short hypocotyl in white light1 transcript=eq;prot=eq; GO:0010100 IMP
AT1G22920 ath AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype.;COP9 signalosome 5A transcript=eq;prot=eq; GO:0010100 IGI
AT5G46210 ath Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.;cullin4 transcript=eq;prot=eq; GO:0010100 IMP
AT5G42970 ath encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.;Proteasome component (PCI) domain protein transcript=eq;prot=eq; GO:0010100 IMP
AT2G46340 ath Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light.;SPA (suppressor of phyA-105) protein family transcript=eq;prot=eq; GO:0010100 IMP
AT1G71230 ath Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses.;COP9-signalosome 5B transcript=eq;prot=eq; GO:0010100 IGI
AT4G10180 ath Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.;light-mediated development protein 1 / deetiolated1 (DET1) transcript=eq;prot=eq; GO:0010100 IMP
AT4G05420 ath Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.;damaged DNA binding protein 1A transcript=eq;prot=eq; GO:0010100 IGI
AL4G34360 aly name=fgenesh2_kg.4__2847__AT2G46340.1;pid=483787;prot=eq;tid=483787 GO:0010100 ISO
PT11G07900 ptr PACid=17315426;name=POPTR_0011s08280;alias=pt014023m; transcript=eq;prot=eq;protein_id=17315426; GO:0010100 ISO
PT04G13050 ptr PACid=17327652;name=POPTR_0004s14000;alias=pt008122m; transcript=eq;prot=eq;protein_id=17327652; GO:0010100 ISO
ME03859G00210 mes PACid=17972282;RNAname=cassava4.1_001775m;GeneName=cassava4.1_001776m.g;transcript=ne;prot=eq GO:0010100 ISO
ME04251G00590 mes PACid=17970385;RNAname=cassava4.1_001768m;GeneName=cassava4.1_001768m.g;transcript=eq;prot=eq GO:0010100 ISO
RC29693G00390 rco name=29693.m002002;gene=29693.t000040;note=29693.t000040;transcript=eq;prot=eq GO:0010100 ISO
CP00878G00010 cpa name=evm.TU.supercontig_878.1;pid=evm.TU.supercontig_878.1;prot=eq;transcript=eq GO:0010100 ISO
VV10G04410 vvi name=GSVIVG01021502001; transcript=eq;prot=eq;name=GSVIVG01021502001;pid=GSVIVG01021502001;tid=GSVIVT01021502001; GO:0010100 ISO
TC06G012540 tca RNAname=Tc06_t012540;GeneName=Tc06_g012540;transcript=eq;prot=eq GO:0010100 ISO
GM13G29010 gma 13 pid=16291941;transcript=eq;prot=eq;name=Glyma13g29010.1 GO:0010100 ISO
GM15G10030 gma 15 pid=16298264;transcript=eq;prot=eq;name=Glyma15g10030.1 GO:0010100 ISO
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