GO page  


GO term
GO:0009887
Description
organ morphogenesis
Type
BP
GO depth
3
Number of genes
2131
 

GO distribution

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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 107, showing 20 records out of 2131 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT2G38120 ath Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.;Transmembrane amino acid transporter family protein transcript=eq;prot=eq; GO:0001736 IGI
AT3G12400 ath Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome.;Ubiquitin-conjugating enzyme/RWD-like protein transcript=eq;prot=eq; GO:0010091 IMP
AT3G16630 ath Kinesin-13A localized to entire Golgi stacks. Involved in trichome development.;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0010090 IMP
AT1G69560 ath Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780).;myb domain protein 105 transcript=eq;prot=eq; GO:0010199 IGI
AT1G53230 ath Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.;TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 transcript=eq;prot=eq; GO:0009965 IGI
AT2G20300 ath Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs.;Protein kinase superfamily protein transcript=eq;prot=eq; GO:0048645 IMP
AT5G53950 ath Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.;NAC (No Apical Meristem) domain transcriptional regulator superfamily protein transcript=eq;prot=eq; GO:0010160 IGI
AT5G53950 ath Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.;NAC (No Apical Meristem) domain transcriptional regulator superfamily protein transcript=eq;prot=eq; GO:0048504 IMP
AT1G69780 ath Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.;Homeobox-leucine zipper protein family transcript=eq;prot=eq; GO:0009965 IMP
AT5G09750 ath HECATE 3 (HEC3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: transmitting tissue development, carpel formation, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, transmitting tissue, funicle, septum, vascular system; EXPRESSED DURING: flower development stages, gynoecium developmental stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G00120.1); Has 2886 Blast hits to 2880 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 2841; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcript=eq;prot=eq; GO:0048462 IMP
AT3G12280 ath Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.;retinoblastoma-related 1 transcript=eq;prot=eq; GO:0010090 IMP
AT3G49780 ath Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype.;phytosulfokine 4 precursor transcript=eq;prot=eq; GO:0009887 ISS
AT4G00100 ath Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development;ribosomal protein S13A transcript=eq;prot=eq; GO:0010090 IMP
AT4G00100 ath Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development;ribosomal protein S13A transcript=eq;prot=eq; GO:0009965 IMP
AT1G13180 ath Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype.;Actin-like ATPase superfamily protein transcript=eq;prot=eq; GO:0010090 IMP
AT2G38440 ath Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype.;SCAR homolog 2 transcript=eq;prot=eq; GO:0010090 IMP
AT2G38440 ath Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype.;SCAR homolog 2 transcript=eq;prot=eq; GO:0010091 IMP
AT5G64930 ath Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).;CPR5 protein, putative transcript=eq;prot=eq; GO:0010090 IMP
AT5G41315 ath encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development.;basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcript=eq;prot=eq; GO:0010091 IMP
AT5G06650 ath GLABROUS INFLORESCENCE STEMS 2 (GIS2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, response to gibberellin stimulus, response to cytokinin stimulus, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;C2H2 and C2HC zinc fingers superfamily protein transcript=eq;prot=eq; GO:0010026 IMP
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