GO page  

GO term
chromatin silencing
GO depth
Number of genes

GO distribution

Genes by species
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Tandem/block/both gene duplicate percentage within this GO term :
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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 15, showing 20 records out of 299 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AL6G08870 aly name=fgenesh1_pg.C_scaffold_6000741;pid=350148;prot=eq;tid=350148 GO:0006342 IEA
AL8G21160 aly name=fgenesh2_kg.8__1477__AT5G55760.1;pid=495661;prot=eq;tid=495661 GO:0006342 IEA
AL0G03830 aly name=fgenesh2_kg.77__1__AT5G55760.1;pid=497237;prot=eq;tid=497237 GO:0006342 IEA
AT2G27040 ath AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.;Argonaute family protein transcript=eq;prot=eq; GO:0006342 IMP
AT1G69770 ath Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing.;chromomethylase 3 transcript=eq;prot=eq; GO:0006342 IGI
AT1G08060 ath MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: chromatin remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to 7857 proteins in 726 species: Archae - 6; Bacteria - 999; Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95; Other Eukaryotes - 1384 (source: NCBI BLink).;ATP-dependent helicase family protein transcript=eq;prot=eq; GO:0006342 IMP
AT5G55760 ath Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).;sirtuin 1 transcript=eq;prot=eq; GO:0006342 ISS
AT5G09230 ath Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).;sirtuin 2 transcript=eq;prot=eq; GO:0006342 ISS
AT2G30280 ath Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development.;RNA-directed DNA methylation 4 transcript=eq;prot=eq; GO:0006342 IGI
AT3G48670 ath Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.;XH/XS domain-containing protein transcript=eq;prot=eq; GO:0006342 IGI
AT2G32940 ath Encodes a nuclear localized 879-amino-acid protein that contains conserved PAZ and PIWI domains that is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing.;Argonaute family protein transcript=eq;prot=eq; GO:0006342 IGI
AT5G17690 ath Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.;like heterochromatin protein (LHP1) transcript=eq;prot=eq; GO:0006342 IEP
AT2G36490 ath A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts.;demeter-like 1 transcript=eq;prot=eq; GO:0006342 IMP
BD5G02940 bdi NAD-dependent histone deacetylase activity (Blast2GO) pid=Bradi5g02940.2;tid=Bradi5g02940.2;GeneName=Bradi5g02940;transcript=eq;prot=eq GO:0006342 IEA
BD4G41127 bdi pid=Bradi4g41127.1;tid=Bradi4g41127.1;GeneName=Bradi4g41127;transcript=eq;prot=eq GO:0006342 IEA
CP00037G00100 cpa name=evm.TU.supercontig_37.10;pid=evm.TU.supercontig_37.10;prot=eq;transcript=eq GO:0006342 IEA
CP00012G01450 cpa name=evm.TU.supercontig_12.145;pid=evm.TU.supercontig_12.145;prot=eq;transcript=eq GO:0006342 IEA
CR12G08590 cre name=e_gwW.31.70.1;pid=120079;prot=eq;tid=120079;transcript=eq GO:0006342 IEA
CR24G00060 cre name=au.g9907_t1;pid=291988;prot=eq;tid=291995;transcript=eq GO:0006342 IEA
CR10G09630 cre name=e_gwW.4.63.1;pid=113408;prot=eq;tid=113408;transcript=eq GO:0006342 IEA
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