GO page  


GO term
GO:0006278
Description
RNA-dependent DNA replication
Type
BP
GO depth
6
Number of genes
3341
 

GO distribution

Genes by species
Genes by evidence tag
 
 
Tandem/block/both gene duplicate percentage within this GO term :
This page uses the Flash plugin.

Toolbox


Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 168, showing 20 records out of 3341 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT5G04050 ath RNA-directed DNA polymerase (reverse transcriptase); FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G74350.1); Has 3089 Blast hits to 3057 proteins in 1086 species: Archae - 3; Bacteria - 2166; Metazoa - 8; Fungi - 43; Plants - 770; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).;RNA-directed DNA polymerase (reverse transcriptase) transcript=eq;prot=eq; GO:0006278 IEA
AT5G46920 ath Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Intron maturase, type II family protein transcript=eq;prot=eq; GO:0006278 ISS
ATMG00520 ath hypothetical protein;Intron maturase, type II family protein transcript=eq;prot=eq; GO:0006278 IEA
AT1G74350 ath Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, stem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase) (TAIR:AT5G04050.1); Has 3669 Blast hits to 3587 proteins in 1202 species: Archae - 32; Bacteria - 2608; Metazoa - 4; Fungi - 43; Plants - 874; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).;Intron maturase, type II family protein transcript=eq;prot=eq; GO:0006278 ISS
AT4G29090 ath Ribonuclease H-like superfamily protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G34320.1); Has 2218 Blast hits to 2138 proteins in 33 species: Archae - 2; Bacteria - 6; Metazoa - 6; Fungi - 0; Plants - 2203; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;Ribonuclease H-like superfamily protein transcript=eq;prot=eq; GO:0006278 ISS
AT5G16850 ath Encodes the catalytic subunit of telomerase reverse transcriptase. Involved in telomere homeostasis. Homozygous double mutants with ATR show gross morphological defects over a period of generations. TERT shows Class II telomerase activity in vitro, indicating that it can initiate de novo telomerase synthesis on non-telomeric DNA, often using a preferred position within the telomerase-bound RNA.;telomerase reverse transcriptase transcript=eq;prot=eq; GO:0006278 IEA
AT1G30010 ath Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT5G46920.1); Has 4269 Blast hits to 4093 proteins in 800 species: Archae - 33; Bacteria - 3762; Metazoa - 5; Fungi - 54; Plants - 249; Viruses - 3; Other Eukaryotes - 163 (source: NCBI BLink).;Intron maturase, type II family protein transcript=eq;prot=eq; GO:0006278 ISS
ATMG01250 ath hypothetical protein;RNA-directed DNA polymerase (reverse transcriptase) transcript=eq;prot=eq; GO:0006278 IEA
AT4G20520 ath RNA binding;RNA-directed DNA polymerases; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477), Protein of unknown function DUF1204 (InterPro:IPR009596), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1204) (TAIR:AT4G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RNA binding;RNA-directed DNA polymerases transcript=eq;prot=eq; GO:0006278 IEA
BD2G42996 bdi pid=Bradi2g42996.1;tid=Bradi2g42996.1;GeneName=Bradi2g42996;transcript=eq;prot=eq GO:0006278 IEA
BD2G30447 bdi pid=Bradi2g30447.2;tid=Bradi2g30447.2;GeneName=Bradi2g30447;transcript=eq;prot=eq GO:0006278 IEA
BD4G12860 bdi pid=Bradi4g12860.1;tid=Bradi4g12860.1;GeneName=Bradi4g12860;transcript=eq;prot=eq GO:0006278 IEA
BD5G06126 bdi pid=Bradi5g06126.1;tid=Bradi5g06126.1;GeneName=Bradi5g06126;transcript=eq;prot=eq GO:0006278 IEA
BD4G27382 bdi pid=Bradi4g27382.1;tid=Bradi4g27382.1;GeneName=Bradi4g27382;transcript=eq;prot=eq GO:0006278 IEA
BD1G54640 bdi RNA-directed DNA polymerase activity, aspartic-type endopeptidase activity (Blast2GO) pid=Bradi1g54640.1;tid=Bradi1g54640.1;GeneName=Bradi1g54640;transcript=eq;prot=eq GO:0006278 IEA
BD2G35425 bdi pid=Bradi2g35425.1;tid=Bradi2g35425.1;GeneName=Bradi2g35425;transcript=eq;prot=eq GO:0006278 IEA
BD1G31400 bdi pid=Bradi1g31400.1;tid=Bradi1g31400.1;GeneName=Bradi1g31400;transcript=eq;prot=eq GO:0006278 IEA
BD3G35460 bdi pid=Bradi3g35460.1;tid=Bradi3g35460.1;GeneName=Bradi3g35460;transcript=eq;prot=eq GO:0006278 IEA
BD5G20467 bdi pid=Bradi5g20467.1;tid=Bradi5g20467.1;GeneName=Bradi5g20467;transcript=eq;prot=eq GO:0006278 IEA
BD3G05385 bdi pid=Bradi3g05385.1;tid=Bradi3g05385.1;GeneName=Bradi3g05385;transcript=eq;prot=eq GO:0006278 IEA
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 next >>

Download genes

Include following columns
gene_id
species
description
comment
go
evidence