GO page  


GO term
GO:0005775
Description
vacuolar lumen
Type
CC
GO depth
4
Number of genes
55
 

GO distribution

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Genes by evidence tag
 
 
Tandem/block/both gene duplicate percentage within this GO term :
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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 3, showing 20 records out of 55 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AT4G21980 ath Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation.;Ubiquitin-like superfamily protein transcript=eq;prot=eq; GO:0005775 NAS
AT3G15580 ath Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition.;Ubiquitin-like superfamily protein transcript=eq;prot=eq; GO:0005775 NAS
AT3G55130 ath Encodes a vacuole localized protein of the ABC transporter White-Brown Complex (WBC) family. When overexpressed in planta, confers resistance to kanamycin.;white-brown complex homolog 19 transcript=eq;prot=eq; GO:0005775 IDA
GM20G38610 gma 20 pid=16318307;transcript=eq;prot=eq;name=Glyma20g38610.1 GO:0005775 ISO
LJ5G032150 lja prot=eq;transcript=eq;scaffold=CM0260;name=chr5.CM0260.440.nc GO:0005775 ISO
MT1G115790 mtr ABC transporter G family member 1 (AHRD V1 ***- O80946); contains Interpro domain(s) IPR013525 ABC-2 type transporter transcript=eq;prot=eq;pid=Medtr1g115790.1; GO:0005775 ISO
MD00G312260 mdo transcript=eq;prot=eq;pid=MDP0000241976;tid=MDP0000241976;contig=MDC013249.291 GO:0005775 ISO
MD01G010250 mdo transcript=eq;prot=eq;pid=MDP0000299379;tid=MDP0000299379;contig=MDC013249.319 GO:0005775 ISO
MD00G159130 mdo transcript=eq;prot=eq;pid=MDP0000123085;tid=MDP0000123085;contig=MDC006835.380 GO:0005775 ISO
FV7G25220 fve ABC transporter G family member 6 (ABC transporter ABCG.6) (similar to) transcript=eq;prot=eq;pid=gene23360 GO:0005775 ISO
PT10G20890 ptr PACid=17335396;name=POPTR_0010s22030;alias=pt011314m,fgenesh4_pm.C_LG_X000862,PtrWBC1-2; transcript=eq;prot=eq;protein_id=17335396; GO:0005775 ISO
PT08G04590 ptr PACid=17323371;name=POPTR_0008s04780;alias=pt026631m; transcript=eq;prot=eq;protein_id=17323371; GO:0005775 ISO
ME12004G00280 mes PACid=17973767;RNAname=cassava4.1_002248m;GeneName=cassava4.1_002248m.g;transcript=eq;prot=eq GO:0005775 ISO
ME04165G00380 mes PACid=17972574;RNAname=cassava4.1_025593m;GeneName=cassava4.1_025593m.g;transcript=eq;prot=eq GO:0005775 ISO
RC29758G00390 rco name=29758.m000676;gene=29758.t000039;note=29758.t000039;transcript=eq;prot=eq GO:0005775 ISO
TC10G004440 tca RNAname=Tc10_t004440;GeneName=Tc10_g004440;transcript=eq;prot=eq GO:0005775 ISO
CP00001G02930 cpa name=evm.TU.supercontig_1.293;pid=evm.TU.supercontig_1.293;prot=eq;transcript=eq GO:0005775 ISO
VV13G08790 vvi name=GSVIVG01032625001; transcript=eq;prot=eq;name=GSVIVG01032625001;pid=GSVIVG01032625001;tid=GSVIVT01032625001; GO:0005775 ISO
AL6G13290 aly name=fgenesh2_kg.6__1311__AT5G13580.1;pid=488177;prot=eq;tid=488177 GO:0005775 ISO
AT5G13580 ath ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;ABC-2 type transporter family protein transcript=eq;prot=eq; GO:0005775 ISO
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