GO page  


GO term
GO:0005674
Description
transcription factor TFIIF complex
Type
CC
GO depth
4
Number of genes
53
 

GO distribution

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Genes by evidence tag
 
 
Tandem/block/both gene duplicate percentage within this GO term :
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Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 1 of 3, showing 20 records out of 53 total, starting on record 1, ending on 20

gene_id species description comment go evidence
AL5G22040 aly name=Al_scaffold_0005_2101;pid=866622;prot=eq;tid=898135 GO:0005674 IEA
AL5G22020 aly name=fgenesh1_pg.C_scaffold_5001715;pid=348323;prot=eq;tid=348323 GO:0005674 IEA
AL2G24450 aly name=Al_scaffold_0002_2256;pid=877662;prot=eq;tid=909175 GO:0005674 IEA
AT1G75510 ath Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).;Transcription initiation factor IIF, beta subunit transcript=eq;prot=eq; GO:0005674 ISS
AT3G52270 ath Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, catalytic activity, ATP binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIF complex; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT1G75510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Transcription initiation factor IIF, beta subunit transcript=eq;prot=eq; GO:0005674 IEA
BD2G20310 bdi ATP binding (Blast2GO) pid=Bradi2g20310.1;tid=Bradi2g20310.1;GeneName=Bradi2g20310;transcript=eq;prot=eq GO:0005674 IEA
BD2G51340 bdi ATP binding (Blast2GO) pid=Bradi2g51340.1;tid=Bradi2g51340.1;GeneName=Bradi2g51340;transcript=eq;prot=eq GO:0005674 IEA
CP00466G00080 cpa name=evm.TU.supercontig_466.8;pid=evm.TU.supercontig_466.8;prot=eq;transcript=eq GO:0005674 IEA
CP00140G00060 cpa name=evm.TU.supercontig_140.6;pid=evm.TU.supercontig_140.6;prot=eq;transcript=eq GO:0005674 IEA
CR19G00370 cre name=pg.19_#_29;pid=333515;prot=eq;tid=333522;transcript=eq GO:0005674 IEA
FV2G39040 fve Transcription initiation factor IIF subunit beta (probable) transcript=eq;prot=eq;pid=gene08474 GO:0005674 IEA
FV7G24230 fve RNA pseudourine synthase 5 (similar to) transcript=eq;prot=eq;pid=gene23203 GO:0005674 IEA
GM06G03070 gma 06 pid=16261526;transcript=eq;prot=eq;name=Glyma06g03070.1 GO:0005674 IEA
GM03G30350 gma 03 pid=16252833;transcript=eq;prot=eq;name=Glyma03g30350.1 GO:0005674 IEA
GM05G17350 gma 05 pid=16259041;transcript=eq;prot=eq;name=Glyma05g17350.1 GO:0005674 IEA
GM04G03030 gma 04 pid=16254665;transcript=eq;prot=eq;name=Glyma04g03030.1 GO:0005674 IEA
GM17G23220 gma 17 pid=16306313;transcript=eq;prot=eq;name=Glyma17g23220.1 GO:0005674 IEA
LJ0G267300 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_089892;name=LjSGA_089892.1 GO:0005674 IEA
LJ1G023700 lja prot=eq;transcript=eq;scaffold=CM0195;name=chr1.CM0195.330.nc GO:0005674 IEA
MD01G009120 mdo transcript=eq;prot=eq;pid=MDP0000422742;tid=MDP0000422742;contig=MDC007784.117 GO:0005674 IEA
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