Gene Overview 
General information
- Gene id
- VVMG00570
- Species
- Vitis vinifera
- Transcript
- VVMG00570.1
- Coordinates
- 272086 - 273933
- Strand
- positive
- Chromosome
- mitochondrial
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000961 117 genes in 23 species
- Sub family
- ORTHO001130 41 genes in 23 species
- Description
- psbA;PSII 32 kDa protein;protein_id=CAQ77603.1;
- Comment
- Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0032991 macromolecular complex C_Hunter 3 34 120 0.000000000478788 GO:0006091 generation of precursor metabolites and energy C_Hunter 3 12 135 0.0000893632 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR005867 Photosystem II reaction centre protein PsbA/D1 IPR000484 Photosynthetic reaction centre, L/M