Gene Overview 
General information
- Gene id
- VV19G04040
- Species
- Vitis vinifera
- Transcript
- VV19G04040.1
- Coordinates
- 4309670 - 4313880
- Strand
- positive
- Chromosome
- chr19
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000006 3414 genes in 20 species
- Sub family
- ORTHO012317 16 genes in 5 species
- Duplication type
- Tandem duplicate
- Description
- name=GSVIVG01014482001;
- Comment
- transcripteqnameGSVIVG01014482001Protein idGSVIVG01014482001Transcript idGSVIVT01014482001Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0005529 sugar binding C_Hunter 3 50 88 1.43672e-73 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR008271 Serine/threonine-protein kinase, active site IPR003609 Apple-like IPR011009 Protein kinase-like domain IPR013227 PAN-2 domain IPR017442 Serine/threonine-protein kinase-like domain IPR000719 Protein kinase, catalytic domain IPR017441 Protein kinase, ATP binding site IPR000858 S-locus glycoprotein