Gene Overview 
General information
- Gene id
- VV18G05380
- Species
- Vitis vinifera
- Transcript
- VV18G05380.1
- Coordinates
- 6881993 - 6883411
- Strand
- negative
- Chromosome
- chr18
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000124 555 genes in 20 species
- Sub family
- ORTHO020567 6 genes in 5 species
- Description
- name=GSVIVG01009274001;
- Comment
- transcripteqnameGSVIVG01009274001Protein idGSVIVG01009274001Transcript idGSVIVT01009274001Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0004601 peroxidase activity C_Hunter 1 4 4 0.0000460061 GO:0006979 response to oxidative stress C_Hunter 3 14 194 0.000400066 GO:0005634 nucleus C_Hunter 4 47 318 0.000770734 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR003106 Leucine zipper, homeobox-associated IPR001356 Homeobox IPR017970 Homeobox, conserved site IPR012287 Homeodomain-related IPR009057 Homeodomain-like