Gene Overview  


General information


Gene id
VV16G05530
Species
Vitis vinifera
Transcript
VV16G05530.1
Coordinates
1371854 - 1398377
Strand
negative
Chromosome
chr16
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000007   3000 genes in 25 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
name=GSVIVG01024357001;
Comment
transcript
eq
 
name
GSVIVG01024357001
 
Protein id
GSVIVG01024357001
 
Transcript id
GSVIVT01024357001
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0003824catalytic activityC_Hunter360880.000204033
GO:0006807nitrogen compound metabolic processC_Hunter3442100.000237009
InterPro domain(s)
Interpro idDescription
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
IPR012287 Homeodomain-related
IPR001584 Integrase, catalytic core
IPR014778 Myb, DNA-binding
IPR001005 SANT, DNA-binding
IPR017930 HTH transcriptional regulator, Myb-type, DNA-binding
IPR009057 Homeodomain-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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