Gene Overview 
General information
- Gene id
- VV12G05520
- Species
- Vitis vinifera
- Transcript
- VV12G05520.1
- Coordinates
- 16873815 - 16901630
- Strand
- negative
- Chromosome
- chr12
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000009 2595 genes in 21 species
- Sub family
- ORTHO000012 254 genes in 15 species
- Duplication type
- Tandem duplicate
- Description
- name=GSVIVG01023015001;
- Comment
- transcripteqnameGSVIVG01023015001Protein idGSVIVG01023015001Transcript idGSVIVT01023015001Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0006915 apoptosis C_Hunter 1 15 69 0.000000784427 GO:0012501 programmed cell death C_Hunter 3 30 288 0.00000051365 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001611 Leucine-rich repeat IPR011046 WD40 repeat-like-containing domain IPR000767 Disease resistance protein IPR002182 NB-ARC