Gene Overview 
General information
- Gene id
- VV08G09170
- Species
- Vitis vinifera
- Transcript
- VV08G09170.1
- Coordinates
- 20244494 - 20247931
- Strand
- positive
- Chromosome
- chr8
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000435 218 genes in 20 species
- Sub family
- ORTHO006602 24 genes in 17 species
- Description
- name=GSVIVG01033496001;
- Comment
- transcripteqnameGSVIVG01033496001Protein idGSVIVG01033496001Transcript idGSVIVT01033496001Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0005488 binding C_Hunter 3 129 228 0.000497855 GO:0005488 binding C_Hunter 4 99 222 0.000258286 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR014045 Protein phosphatase 2C, N-terminal IPR001932 Protein phosphatase 2C-related IPR000222 Protein phosphatase 2C, manganese/magnesium aspartate binding site IPR015655 Protein phosphatase 2C