Gene Overview 
General information
- Gene id
- TC10G001870
- Species
- Theobroma cacao
- Transcript
- TC10G001870.1
- Coordinates
- 1047686 - 1049116
- Strand
- negative
- Chromosome
- Tc10
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM003514 38 genes in 19 species
- Sub family
- ORTHO002481 32 genes in 19 species
- Comment
- RNAnameTc10_t001870GeneNameTc10_g001870transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0050896 response to stimulus C_Hunter 1 27 80 0.000000000151179 GO:0050896 response to stimulus C_Hunter 3 55 260 0.0000000000000249421 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR009743 Hs1pro-1, C-terminal IPR009869 Hs1pro-1, N-terminal