Gene Overview 
General information
- Gene id
- TC09G033040
- Species
- Theobroma cacao
- Transcript
- TC09G033040.1
- Coordinates
- 27099438 - 27104555
- Strand
- positive
- Chromosome
- Tc09
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000031 1620 genes in 22 species
- Sub family
- ORTHO001584 37 genes in 16 species
- Duplication type
- Tandem duplicate and Block duplicate
- Comment
- RNAnameTc09_t033040GeneNameTc09_g033040transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0044464 cell part C_Hunter 1 28 53 0.0000354604 GO:0044464 cell part C_Hunter 3 105 297 0.0000000000167441 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR016196 Major facilitator superfamily, general substrate transporter IPR000109 Oligopeptide transporter