Gene Overview 
General information
- Gene id
- TC09G033020
- Species
- Theobroma cacao
- Transcript
- TC09G033020.1
- Coordinates
- 27092892 - 27096009
- Strand
- positive
- Chromosome
- Tc09
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000019 1784 genes in 25 species
- Sub family
- ORTHO010131 19 genes in 16 species
- Duplication type
- Tandem duplicate
- Comment
- RNAnameTc09_t033020GeneNameTc09_g033020transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
Loading...please wait
previous gene
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- Functional clusters
-
GO term Description Type Experiment Cluster size Number of genes E-value GO:0005488 binding C_Hunter 1 30 62 0.000152767 GO:0005488 binding C_Hunter 3 113 299 0.00000000000000509307 GO:0003824 catalytic activity C_Hunter 3 90 292 0.000000120491 GO:0003824 catalytic activity C_Hunter 3 84 299 0.000101722 - InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR011009 Protein kinase-like domain IPR000719 Protein kinase, catalytic domain IPR017442 Serine/threonine-protein kinase-like domain IPR002290 Serine/threonine-protein kinase domain IPR020635 Tyrosine-protein kinase, catalytic domain