Gene Overview  


General information


Gene id
TC09G031420
Species
Theobroma cacao
Transcript
TC09G031420.1
Coordinates
26144300 - 26149434
Strand
positive
Chromosome
Tc09
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000025   1690 genes in 25 species
Sub family
ORTHO001211   40 genes in 24 species
Duplication type
Block duplicate
Comment
RNAname
Tc09_t031420
 
GeneName
Tc09_g031420
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0005488bindingC_Hunter31132990.00000000000000509307
GO:0044464cell partC_Hunter3912930.00000553404
GO:0005488bindingC_Hunter3842620.00000586844
GO:0003824catalytic activityC_Hunter3842990.000101722
GO:0005488bindingC_Hunter4793310.000000279845
GO:0008152metabolic processC_Hunter4703300.0000331677
InterPro domain(s)
Interpro idDescription
IPR000642 Peptidase M41
IPR003959 ATPase, AAA-type, core
IPR003593 ATPase, AAA+ type, core
IPR005936 Peptidase M41, FtsH
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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