Gene Overview 
General information
- Gene id
- TC09G017950
- Species
- Theobroma cacao
- Transcript
- TC09G017950.1
- Coordinates
- 13078430 - 13080967
- Strand
- positive
- Chromosome
- Tc09
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000003 4618 genes in 25 species
- Sub family
- ORTHO008576 21 genes in 18 species
- Duplication type
- Block duplicate
- Comment
- RNAnameTc09_t017950GeneNameTc09_g017950transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR002885 Pentatricopeptide repeat