Gene Overview  


General information


Gene id
TC09G007720
Species
Theobroma cacao
Transcript
TC09G007720.1
Coordinates
4522955 - 4530117
Strand
positive
Chromosome
Tc09
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000395   234 genes in 25 species
Sub family
ORTHO006823   24 genes in 17 species
Duplication type
Tandem duplicate   and   Block duplicate
Comment
RNAname
Tc09_t007720
 
GeneName
Tc09_g007720
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0009987cellular processC_Hunter3992970.000000000000123502
GO:0008152metabolic processC_Hunter31043000.0000000000122716
InterPro domain(s)
Interpro idDescription
IPR013765 DNA recombination and repair protein RecA
IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
IPR014774 Circadian clock protein KaiC/DNA repair protein RadA
IPR020588 DNA recombination/repair protein RecA/RadB, ATP-binding domain
IPR020587 DNA recombination/repair protein RecA, monomer-monomer interface
IPR003593 ATPase, AAA+ type, core
IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found