Gene Overview 
General information
- Gene id
- TC08G009120
- Species
- Theobroma cacao
- Transcript
- TC08G009120.1
- Coordinates
- 5286267 - 5291111
- Strand
- negative
- Chromosome
- Tc08
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000040 1309 genes in 25 species
- Sub family
- ORTHO005554 25 genes in 15 species
- Comment
- RNAnameTc08_t009120GeneNameTc08_g009120transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0044464 cell part C_Hunter 3 106 300 0.0000000000127091 GO:0044464 cell part C_Hunter 3 96 298 0.000000171767 GO:0044464 cell part C_Hunter 4 97 319 0.0000000000000400166 GO:0009987 cellular process C_Hunter 4 68 313 0.00000646727 GO:0044464 cell part C_Hunter 4 77 328 0.0000957857 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR016196 Major facilitator superfamily, general substrate transporter IPR003663 Sugar/inositol transporter