Gene Overview  


General information


Gene id
TC08G009010
Species
Theobroma cacao
Transcript
TC08G009010.1
Coordinates
5225753 - 5227286
Strand
negative
Chromosome
Tc08
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000007   3000 genes in 25 species
Sub family
ORTHO001329   39 genes in 16 species
Duplication type
Block duplicate
Comment
RNAname
Tc08_t009010
 
GeneName
Tc08_g009010
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0005488bindingC_Hunter3862380.00000000225565
GO:0005488bindingC_Hunter4753140.00000475322
InterPro domain(s)
Interpro idDescription
IPR017930 HTH transcriptional regulator, Myb-type, DNA-binding
IPR009057 Homeodomain-like
IPR012287 Homeodomain-related
IPR014778 Myb, DNA-binding
IPR001005 SANT, DNA-binding
IPR015495 Myb transcription factor
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found