Gene Overview 
General information
- Gene id
- TC08G002380
- Species
- Theobroma cacao
- Transcript
- TC08G002380.1
- Coordinates
- 1225141 - 1226967
- Strand
- negative
- Chromosome
- Tc08
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000069 899 genes in 24 species
- Sub family
- ORTHO003687 28 genes in 18 species
- Duplication type
- Tandem duplicate and Block duplicate
- Comment
- RNAnameTc08_t002380GeneNameTc08_g002380transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
Loading...please wait
previous gene
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- Functional clusters
-
GO term Description Type Experiment Cluster size Number of genes E-value GO:0003824 catalytic activity C_Hunter 1 30 63 0.0000300651 GO:0003824 catalytic activity C_Hunter 3 95 252 0.0000000000000140476 - InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR001509 NAD-dependent epimerase/dehydratase IPR016040 NAD(P)-binding domain