Gene Overview 
General information
- Gene id
- TC07G001390
- Species
- Theobroma cacao
- Transcript
- TC07G001390.1
- Coordinates
- 690037 - 693376
- Strand
- positive
- Chromosome
- Tc07
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000982 115 genes in 25 species
- Sub family
- ORTHO007802 22 genes in 19 species
- Comment
- RNAnameTc07_t001390GeneNameTc07_g001390transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0005488 binding C_Hunter 3 93 235 0.000000000000251063 GO:0044464 cell part C_Hunter 3 66 202 0.00019364 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002815 Spo11/DNA topoisomerase VI, subunit A IPR013049 Spo11/DNA topoisomerase VI, subunit A, N-terminal IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR013048 Meiotic recombination, Spo11