Gene Overview  


General information


Gene id
TC06G013970
Species
Theobroma cacao
Transcript
TC06G013970.1
Coordinates
11564342 - 11569421
Strand
negative
Chromosome
Tc06
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000002   5123 genes in 25 species
Sub family
ORTHO000094   119 genes in 15 species
Duplication type
Tandem duplicate   and   Block duplicate
Comment
RNAname
Tc06_t013970
 
GeneName
Tc06_g013970
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0004674protein serine/threonine kinase activityC_Hunter117680.0000000102516
GO:0044238primary metabolic processC_Hunter3832870.0000000000148244
GO:0003824catalytic activityC_Hunter3923000.0000000953745
GO:0005488bindingC_Hunter3932980.00000322979
InterPro domain(s)
Interpro idDescription
IPR011009 Protein kinase-like domain
IPR000719 Protein kinase, catalytic domain
IPR001245 Serine/threonine/tyrosine-protein kinase
IPR001611 Leucine-rich repeat
IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2
IPR003591 Leucine-rich repeat, typical subtype
IPR002290 Serine/threonine-protein kinase domain
IPR020635 Tyrosine-protein kinase, catalytic domain
IPR020474 Toll-like receptor, leucine rich repeat-containing
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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