Gene Overview  


General information


Gene id
TC06G001170
Species
Theobroma cacao
Transcript
TC06G001170.1
Coordinates
724989 - 729448
Strand
positive
Chromosome
Tc06
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000182   407 genes in 14 species
Sub family
ORTHO007868   22 genes in 4 species
Duplication type
Tandem duplicate   and   Block duplicate
Comment
RNAname
Tc06_t001170
 
GeneName
Tc06_g001170
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0007165signal transductionC_Hunter112420.00000000112198
GO:0005515protein bindingC_Hunter121740.00000166156
GO:0007165signal transductionC_Hunter312420.00000000112198
GO:0005515protein bindingC_Hunter324910.000000381702
GO:0005488bindingC_Hunter3611760.0000661129
InterPro domain(s)
Interpro idDescription
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR001965 Zinc finger, PHD-type
IPR011424 C1-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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