Gene Overview 
General information
- Gene id
- TC05G027930
- Species
- Theobroma cacao
- Transcript
- TC05G027930.1
- Coordinates
- 23392379 - 23393326
- Strand
- negative
- Chromosome
- Tc05
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM006354 22 genes in 17 species
- Comment
- RNAnameTc05_t027930GeneNameTc05_g027930transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0008152 metabolic process C_Hunter 3 101 300 0.000000000289691 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR003500 Ribose/galactose isomerase IPR011051 Cupin, RmlC-type IPR012100 DNA-damage-repair/toleration protein, DRT102 IPR013096 Cupin 2, conserved barrel