Gene Overview  


General information


Gene id
TC05G005840
Species
Theobroma cacao
Transcript
TC05G005840.1
Coordinates
3125523 - 3130328
Strand
positive
Chromosome
Tc05
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000453   213 genes in 25 species
Sub family
ORTHO015183   10 genes in 9 species
Duplication type
Block duplicate
Comment
RNAname
Tc05_t005840
 
GeneName
Tc05_g005840
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044424intracellular partC_Hunter117360.000800332
GO:0044424intracellular partC_Hunter216360.000406907
GO:0044464cell partC_Hunter3822260.00000000536724
GO:0044464cell partC_Hunter4632260.00000161416
GO:0003824catalytic activityC_Hunter4542660.000556415
InterPro domain(s)
Interpro idDescription
IPR002016 Haem peroxidase, plant/fungal/bacterial
IPR010255 Haem peroxidase
IPR002207 Plant ascorbate peroxidase
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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