Gene Overview  


General information


Gene id
TC05G005080
Species
Theobroma cacao
Transcript
TC05G005080.1
Coordinates
2713434 - 2716127
Strand
positive
Chromosome
Tc05
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO000481   57 genes in 24 species
Duplication type
Block duplicate
Comment
RNAname
Tc05_t005080
 
GeneName
Tc05_g005080
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0005488bindingC_Hunter3892370.0000000000573693
GO:0044464cell partC_Hunter3822260.00000000536724
GO:0044464cell partC_Hunter4632260.00000161416
GO:0005488bindingC_Hunter4682730.00000204317
InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR020851 Small GTPase
IPR006688 ADP-ribosylation factor
IPR003579 Ras small GTPase, Rab type
IPR003577 Ras small GTPase, Ras type
IPR003578 Small GTPase, Rho type
IPR002041 Ran GTPase
IPR001806 Ras GTPase
IPR013753 Ras
IPR006762 Gtr1/RagA G protein
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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