Gene Overview 
General information
- Gene id
- TC04G030450
- Species
- Theobroma cacao
- Transcript
- TC04G030450.1
- Coordinates
- 23281580 - 23284693
- Strand
- negative
- Chromosome
- Tc04
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000326 267 genes in 20 species
- Sub family
- ORTHO000032 195 genes in 20 species
- Duplication type
- Tandem duplicate
- Comment
- RNAnameTc04_t030450GeneNameTc04_g030450transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0003824 catalytic activity C_Hunter 1 26 55 0.000498236 GO:0008152 metabolic process C_Hunter 3 63 168 0.000000173846 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001764 Glycoside hydrolase, family 3, N-terminal IPR002772 Glycoside hydrolase, family 3, C-terminal IPR017853 Glycoside hydrolase, catalytic core