Gene Overview  


General information


Gene id
TC04G002590
Species
Theobroma cacao
Transcript
TC04G002590.1
Coordinates
1641239 - 1643188
Strand
negative
Chromosome
Tc04
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM001893   65 genes in 24 species
Sub family
ORTHO001178   41 genes in 24 species
Comment
RNAname
Tc04_t002590
 
GeneName
Tc04_g002590
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0005488bindingC_Hunter3722180.0000274383
GO:0009987cellular processC_Hunter4673090.0000078795
GO:0005488bindingC_Hunter4713190.000338079
InterPro domain(s)
Interpro idDescription
IPR009051 Alpha-helical ferredoxin
IPR001041 Ferredoxin
IPR012675 Beta-grasp fold, ferredoxin-type
IPR012285 Fumarate reductase, C-terminal
IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain
IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found