Gene Overview 
General information
- Gene id
- TC04G001040
- Species
- Theobroma cacao
- Transcript
- TC04G001040.1
- Coordinates
- 658561 - 660962
- Strand
- positive
- Chromosome
- Tc04
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000069 899 genes in 24 species
- Sub family
- ORTHO005902 25 genes in 16 species
- Comment
- RNAnameTc04_t001040GeneNameTc04_g001040transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0003824 catalytic activity C_Hunter 3 67 199 0.00000097163 GO:0005488 binding C_Hunter 3 72 218 0.0000274383 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR016040 NAD(P)-binding domain IPR001509 NAD-dependent epimerase/dehydratase