Gene Overview  


General information


Gene id
TC03G027500
Species
Theobroma cacao
Transcript
TC03G027500.1
Coordinates
23263142 - 23266389
Strand
positive
Chromosome
Tc03
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM001313   88 genes in 20 species
Sub family
ORTHO011835   16 genes in 12 species
Duplication type
Block duplicate
Comment
RNAname
Tc03_t027500
 
GeneName
Tc03_g027500
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0005488bindingC_Hunter229860.000521509
GO:0005488bindingC_Hunter31152913.66317e-17
GO:0044464cell partC_Hunter31122950.00000000000000360739
GO:0044464cell partC_Hunter3943000.00000161448
GO:0005488bindingC_Hunter4893240.000000000000565844
GO:0009987cellular processC_Hunter4712760.0000000000253902
InterPro domain(s)
Interpro idDescription
IPR011598 Helix-loop-helix DNA-binding
IPR001092 Helix-loop-helix DNA-binding domain
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found