Gene Overview  


General information


Gene id
TC03G021850
Species
Theobroma cacao
Transcript
TC03G021850.1
Coordinates
19816311 - 19819671
Strand
negative
Chromosome
Tc03
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000097   705 genes in 22 species
Sub family
ORTHO002068   34 genes in 20 species
Duplication type
Block duplicate
Comment
RNAname
Tc03_t021850
 
GeneName
Tc03_g021850
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter31032980.000000000177527
GO:0005488bindingC_Hunter3962900.0000000362285
GO:0044464cell partC_Hunter4873180.00000000134061
GO:0005488bindingC_Hunter4783010.00000000917266
InterPro domain(s)
Interpro idDescription
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding
IPR001077 O-methyltransferase, family 2
IPR012967 Plant methyltransferase dimerisation
IPR016461 O-methyltransferase, COMT, eukaryota
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found