Gene Overview  


General information


Gene id
TC03G019480
Species
Theobroma cacao
Transcript
TC03G019480.1
Coordinates
18423199 - 18427023
Strand
negative
Chromosome
Tc03
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000002   5123 genes in 25 species
Sub family
ORTHO001720   36 genes in 18 species
Comment
RNAname
Tc03_t019480
 
GeneName
Tc03_g019480
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter31062990.00000000000975134
GO:0008152metabolic processC_Hunter31012970.000000000138068
GO:0005488bindingC_Hunter31012990.00000000222932
GO:0044464cell partC_Hunter4873180.00000000134061
GO:0009987cellular processC_Hunter4753270.00000000725179
GO:0005488bindingC_Hunter4783010.00000000917266
GO:0008152metabolic processC_Hunter4713310.0000129834
InterPro domain(s)
Interpro idDescription
IPR003591 Leucine-rich repeat, typical subtype
IPR002290 Serine/threonine-protein kinase domain
IPR020635 Tyrosine-protein kinase, catalytic domain
IPR020474 Toll-like receptor, leucine rich repeat-containing
IPR000719 Protein kinase, catalytic domain
IPR001611 Leucine-rich repeat
IPR001245 Serine/threonine/tyrosine-protein kinase
IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2
IPR011009 Protein kinase-like domain
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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