Gene Overview  


General information


Gene id
TC03G016500
Species
Theobroma cacao
Transcript
TC03G016500.1
Coordinates
16441417 - 16444171
Strand
positive
Chromosome
Tc03
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Duplication type
Block duplicate
Comment
RNAname
Tc03_t016500
 
GeneName
Tc03_g016500
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter31033000.000000000292986
GO:0005488bindingC_Hunter3933000.0000048227
GO:0044424intracellular partC_Hunter4562260.000000000266369
GO:0005488bindingC_Hunter4713080.0000273096
InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR020851 Small GTPase
IPR001806 Ras GTPase
IPR013753 Ras
IPR006762 Gtr1/RagA G protein
IPR019009 Signal recognition particle receptor, beta subunit
IPR006688 ADP-ribosylation factor
IPR003577 Ras small GTPase, Ras type
IPR003579 Ras small GTPase, Rab type
IPR003578 Small GTPase, Rho type
IPR002041 Ran GTPase
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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