Gene Overview 
General information
- Gene id
- TC02G025620
- Species
- Theobroma cacao
- Transcript
- TC02G025620.1
- Coordinates
- 20758597 - 20761246
- Strand
- positive
- Chromosome
- Tc02
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM002653 48 genes in 20 species
- Sub family
- ORTHO009144 20 genes in 14 species
- Duplication type
- Tandem duplicate
- Comment
- RNAnameTc02_t025620GeneNameTc02_g025620transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR000504 RNA recognition motif, RNP-1 IPR012677 Nucleotide-binding, alpha-beta plait