Gene Overview  


General information


Gene id
TC02G007890
Species
Theobroma cacao
Transcript
TC02G007890.1
Coordinates
4339590 - 4349341
Strand
negative
Chromosome
Tc02
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000618   164 genes in 24 species
Sub family
ORTHO005483   25 genes in 22 species
Comment
RNAname
Tc02_t007890
 
GeneName
Tc02_g007890
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0005488bindingC_Hunter3741930.00000000398064
GO:0008152metabolic processC_Hunter3933000.000000688939
InterPro domain(s)
Interpro idDescription
IPR018329 DNA helicase, ATP-dependent, RecQ type, N-terminal
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR001650 DNA/RNA helicase, C-terminal
IPR018982 RQC domain
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR002121 Helicase/RNase D C-terminal, HRDC domain
IPR014001 DEAD-like helicase, N-terminal
IPR014021 Helicase, superfamily 1/2, ATP-binding domain
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found