Gene Overview 
General information
- Gene id
- TC02G007130
- Species
- Theobroma cacao
- Transcript
- TC02G007130.1
- Coordinates
- 3818366 - 3824033
- Strand
- negative
- Chromosome
- Tc02
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM004860 29 genes in 18 species
- Comment
- RNAnameTc02_t007130GeneNameTc02_g007130transcripteqProtein information
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0005488 binding C_Hunter 3 74 193 0.00000000398064 GO:0005488 binding C_Hunter 4 39 143 0.000630077 - InterPro domain(s)
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Interpro id Description IPR000433 Zinc finger, ZZ-type IPR001005 SANT, DNA-binding IPR007526 SWIRM IPR017884 SANT, eukarya IPR009057 Homeodomain-like IPR014778 Myb, DNA-binding