Gene Overview  


General information


Gene id
TC01G039980
Species
Theobroma cacao
Transcript
TC01G039980.1
Coordinates
30702637 - 30704853
Strand
positive
Chromosome
Tc01
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO000792   47 genes in 23 species
Duplication type
Tandem duplicate
Comment
RNAname
Tc01_t039980
 
GeneName
Tc01_g039980
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter3892990.0000948315
InterPro domain(s)
Interpro idDescription
IPR015600 Rab6-related
IPR020851 Small GTPase
IPR003577 Ras small GTPase, Ras type
IPR003579 Ras small GTPase, Rab type
IPR003578 Small GTPase, Rho type
IPR002041 Ran GTPase
IPR001806 Ras GTPase
IPR013753 Ras
IPR006762 Gtr1/RagA G protein
IPR019009 Signal recognition particle receptor, beta subunit
IPR005225 Small GTP-binding protein
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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