Gene Overview 
General information
- Gene id
- TC01G036020
- Species
- Theobroma cacao
- Transcript
- TC01G036020.1
- Coordinates
- 28634528 - 28641256
- Strand
- positive
- Chromosome
- Tc01
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000363 248 genes in 25 species
- Sub family
- ORTHO001368 39 genes in 19 species
- Duplication type
- Tandem duplicate
- Comment
- RNAnameTc01_t036020GeneNameTc01_g036020transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0008152 metabolic process C_Hunter 1 30 64 0.000168966 GO:0003824 catalytic activity C_Hunter 3 112 286 2.50144e-19 GO:0008152 metabolic process C_Hunter 3 93 298 0.000000455486 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001554 Glycoside hydrolase, family 14 IPR008540 BZR1, transcriptional repressor IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR017853 Glycoside hydrolase, catalytic core IPR001371 Glycoside hydrolase, family 14B, plant