Gene Overview  


General information


Gene id
TC01G008550
Species
Theobroma cacao
Transcript
TC01G008550.1
Coordinates
5020071 - 5021805
Strand
negative
Chromosome
Tc01
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO008970   21 genes in 18 species
Comment
RNAname
Tc01_t008550
 
GeneName
Tc01_g008550
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter227700.000644827
GO:0044464cell partC_Hunter31102880.00000000000000449841
GO:0005488bindingC_Hunter3922890.0000012309
GO:0044464cell partC_Hunter4902631.31279e-16
GO:0005488bindingC_Hunter4752990.000000122583
InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR003577 Ras small GTPase, Ras type
IPR003579 Ras small GTPase, Rab type
IPR003578 Small GTPase, Rho type
IPR002041 Ran GTPase
IPR015595 Rab11-related
IPR020851 Small GTPase
IPR001806 Ras GTPase
IPR013753 Ras
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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