Gene Overview 
General information
- Gene id
- TC01G001360
- Species
- Theobroma cacao
- Transcript
- TC01G001360.1
- Coordinates
- 666495 - 668976
- Strand
- negative
- Chromosome
- Tc01
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM004688 30 genes in 25 species
- Sub family
- ORTHO005395 26 genes in 25 species
- Comment
- RNAnameTc01_t001360GeneNameTc01_g001360transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0044464 cell part C_Hunter 3 102 299 0.000000000634102 GO:0044464 cell part C_Hunter 4 90 318 0.000000000040096 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002658 3-dehydroquinate synthase AroB IPR016037 3-dehydroquinate synthase AroB, subgroup