Gene Overview  


General information


Gene id
PT19G01130
Species
Populus trichocarpa
Transcript
PT19G01130.1
Coordinates
1156663 - 1159649
Strand
negative
Chromosome
scaffold_19
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000066   915 genes in 20 species
Sub family
ORTHO009432   20 genes in 6 species
Duplication type
Tandem duplicate
Description
PACid=17322323;name=POPTR_0019s01320;alias=pt009825m,gw1.XIII.3321.1;
Comment
transcript
eq
 
protein_id
17322323
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0016829lyase activityC_Hunter110250.000000000000560691
GO:0046246terpene biosynthetic processC_Hunter3132730.00000000000000120327
GO:0006629lipid metabolic processC_Hunter3262400.000000483729
InterPro domain(s)
Interpro idDescription
IPR008949 Terpenoid synthase
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
IPR005630 Terpene synthase, metal-binding domain
IPR001906 Terpene synthase-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found