Gene Overview  


General information


Gene id
PT18G08830
Species
Populus trichocarpa
Transcript
PT18G08830.1
Coordinates
10845089 - 10851530
Strand
negative
Chromosome
scaffold_18
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM001318   88 genes in 25 species
Sub family
ORTHO001445   38 genes in 24 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
PACid=17316067;name=POPTR_0018s09780;alias=pt008367m;
Comment
transcript
eq
 
protein_id
17316067
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0006430lysyl-tRNA aminoacylationC_Hunter1230.000910025
InterPro domain(s)
Interpro idDescription
IPR016027 Nucleic acid-binding, OB-fold-like
IPR002313 Lysyl-tRNA synthetase, class II
IPR006195 Aminoacyl-tRNA synthetase, class II, conserved domain
IPR012340 Nucleic acid-binding, OB-fold
IPR018149 Lysyl-tRNA synthetase, class II, C-terminal
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found