Gene Overview 
General information
- Gene id
- PT17G02010
- Species
- Populus trichocarpa
- Transcript
- PT17G02010.1
- Coordinates
- 1610669 - 1614064
- Strand
- negative
- Chromosome
- scaffold_17
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000009 2595 genes in 21 species
- Sub family
- ORTHO000136 97 genes in 8 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- PACid=17318301;name=POPTR_0017s02200;alias=pt028792m,eugene3.00002181;
- Comment
- transcripteqprotein_id17318301Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0012501 programmed cell death C_Hunter 1 13 63 0.0000000622125 GO:0008219 cell death C_Hunter 3 35 235 1.89708e-20 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002182 NB-ARC IPR001611 Leucine-rich repeat IPR000767 Disease resistance protein