Gene Overview 
General information
- Gene id
- PT16G00220
- Species
- Populus trichocarpa
- Transcript
- PT16G00220.1
- Coordinates
- 105557 - 110021
- Strand
- negative
- Chromosome
- scaffold_16
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000501 196 genes in 24 species
- Sub family
- ORTHO000150 92 genes in 24 species
- Description
- PACid=17321160;name=POPTR_0016s00410;alias=pt002678m,estExt_fgenesh4_pm.C_1370011;
- Comment
- transcripteqprotein_id17321160Protein informationCannot create amino acid sequence
- Gene structure
-
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR017853 Glycoside hydrolase, catalytic core IPR008811 Raffinose synthase