Gene Overview 
General information
- Gene id
- PT13G12170
- Species
- Populus trichocarpa
- Transcript
- PT13G12170.1
- Coordinates
- 13425405 - 13426884
- Strand
- negative
- Chromosome
- scaffold_13
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000032 1498 genes in 25 species
- Sub family
- ORTHO016734 8 genes in 6 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- PACid=17339540;name=POPTR_0013s12740;alias=pt031181m,grail3.0142006701,Pt-RAB11.8;
- Comment
- transcripteqprotein_id17339540Protein informationCannot create amino acid sequence
- Gene structure
-
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR013753 Ras IPR006762 Gtr1/RagA G protein IPR005225 Small GTP-binding protein IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR001806 Ras GTPase IPR020851 Small GTPase IPR015595 Rab11-related