Gene Overview 
General information
- Gene id
- PT08G05910
- Species
- Populus trichocarpa
- Transcript
- PT08G05910.1
- Coordinates
- 3606779 - 3612440
- Strand
- negative
- Chromosome
- scaffold_8
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000094 747 genes in 25 species
- Sub family
- ORTHO000961 44 genes in 22 species
- Description
- PACid=17321977;name=POPTR_0008s06100;alias=pt026538m,fgenesh4_pm.C_LG_VIII000230;
- Comment
- transcripteqprotein_id17321977Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain