Gene Overview 
General information
- Gene id
- PT06G18810
- Species
- Populus trichocarpa
- Transcript
- PT06G18810.1
- Coordinates
- 19381977 - 19385530
- Strand
- negative
- Chromosome
- scaffold_6
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000002 5123 genes in 25 species
- Sub family
- ORTHO012114 16 genes in 13 species
- Duplication type
- Block duplicate
- Description
- PACid=17345899;name=POPTR_0006s20330;alias=pt017129m;
- Comment
- transcripteqprotein_id17345899Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001611 Leucine-rich repeat IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2 IPR003591 Leucine-rich repeat, typical subtype IPR020474 Toll-like receptor, leucine rich repeat-containing