Gene Overview 
General information
- Gene id
- PT03G18080
- Species
- Populus trichocarpa
- Transcript
- PT03G18080.1
- Coordinates
- 17886450 - 17888239
- Strand
- positive
- Chromosome
- scaffold_3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000476 205 genes in 20 species
- Sub family
- ORTHO029025 4 genes in 3 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- PACid=17316461;name=POPTR_0003s19030;alias=pt023053m;
- Comment
- transcripteqprotein_id17316461Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0042546 cell wall biogenesis C_Hunter 1 4 5 0.000000114131 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR004938 Xyloglucan fucosyltransferase