Gene Overview  


General information


Gene id
PT03G10000
Species
Populus trichocarpa
Transcript
PT03G10000.1
Coordinates
11803341 - 11815712
Strand
positive
Chromosome
scaffold_3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000101   667 genes in 25 species
Sub family
ORTHO008176   22 genes in 18 species
Duplication type
Block duplicate
Description
PACid=17307734;name=POPTR_0003s10950;alias=pt022607m,eugene3.00030822,CHR926;
Comment
transcript
eq
 
protein_id
17307734
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR001650 DNA/RNA helicase, C-terminal
IPR016197 Chromo domain-like
IPR011011 Zinc finger, FYVE/PHD-type
IPR019786 Zinc finger, PHD-type, conserved site
IPR019787 Zinc finger, PHD-finger
IPR012287 Homeodomain-related
IPR000953 Chromo domain
IPR000330 SNF2-related
IPR009463 Protein of unknown function DUF1087
IPR014021 Helicase, superfamily 1/2, ATP-binding domain
IPR001965 Zinc finger, PHD-type
IPR001005 SANT, DNA-binding
IPR014001 DEAD-like helicase, N-terminal
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found